Below is an example of a mosaic namelist that was used for processing the
extragalactic FLS. The selection of modules to be run is listed at the top of
the file. Note that the single-frame outlier rejection (run_detect_radhit) is
turned off (set = 0) as the coverage is large enough (5 frames per sky
position) that dual outlier and multi-frame rejection, which are both more
reliable than the single-frame rejection, can be used. Also,
run_fiducial_image_frame is switched off, because, in this case the mosaicer
was run previously with just the run_fiducial_image_frame turned on and
created the fiducial frame file FIF_big.tbl (input using FIF_FILE_NAME =
FIF_big.tbl). Points to note: (1) module parameter sets are defined by &s in
front of the module name, and end with &END. (2) Comments are preceded by hash
marks. (3) Lines containing parameter settings must end with a comma even if 
the line is commented out. (4) Spaces must appear on both sides of equal (=) 
signs (5) parameter and module names are case sensitive.

run_medfilter = 1
#detect_radhit does single frame radhit rejection
#by default donot run
run_detect_radhit = 0
have_uncertainties = 1
compute_uncertainties_internally = 0
run_fiducial_image_frame = 0
run_mosaic_interp = 1
run_detect_outlier = 1
run_mosaic_proj = 1
run_mosaic_covg = 1
run_mosaic_dual_outlier = 1
run_level = 1
run_mosaic_outlier = 1
run_mosaic_rmask = 1
run_mosaic_reinterp = 1
run_mosaic_coadder = 1
run_mosaic_combiner = 1
NICE = 0
verbose = 1
delete_intermediate_files = 1
save_namelist = 1
overwrite_dmask  = 0

USE_OUTLIER_FOR_RMASK = 1
USE_DUAL_OUTLIER_FOR_RMASK = 1
USE_REFINED_POINTING = 1
sigma_weighted_coadd = 0

MOSAIC_PIXEL_RATIO_X = 1
MOSAIC_PIXEL_RATIO_Y = 1

DMASK_DIR = Dmask_1
INTERP_DIR = Interp_1
COADDER_DIR = Coadd
COMBINER_DIR = Combine_1
REINTERP_DIR = Reinterp_1
OUTLIER_DIR = Outlier_1
DUAL_OUTLIER_DIR = DualOuliter_1
DETECT_DIR = Detect_1
RMASK_DIR = Rmask_1
MEDFILTER_DIR = Medfilter
OUTPUT_DIR = mosaic_outlier_3
FIF_FILE_NAME = FIF_big.tbl
SIGMA_DIR = Sigma_Orig

IMAGE_STACK_FILE_NAME = chan3_bcd.lis
SIGMALIST_FILE_NAME = chan3_sig.lis
PMASK_FILE_NAME = chan3_pmask.fits
DCE_STATUS_MASK_LIST =  chan3_dmask.lis
#RMASK_LIST = mosaic_outlier_1/Rmask_1/rmask_list.txt

DCE_Status_Mask_Fatal_BitPattern = 32544
PMask_Fatal_BitPattern =  32767
RMask_Fatal_BitPattern = 7

 &FIDUCIALIMAGEFRAMEIN
#   Edge_Padding is given in terms of pixels,
   Edge_Padding = 100,
# if specified CROTA2 is used for FIF without modification,
#   CROTA2 = -9.999000e+01,
   CROTA2 = A,
 &END

 &MEDFILTER
  Window_X = 21,
  Window_Y = 21,
  N_Outliers_Per_Window = 100,
&END

&DETECT_RADHIT
# Detection_Max_Area (Optional, default is 3),
  Detection_Max_Area      = 3,
# Segmentation_Threshold (Optional, default is 3.),
  Segmentation_Threshold  = 3.,
#  Radhit_Threshold (Optional, default is 6.),
  Radhit_Threshold        = 10.,
  Detect_Small_RadHits = 1,
  Detect_Streak_1 = 0,
  Detect_Streak_2 = 0,
#  Streak_Min_Area (Optional, default is 5.),
  Streak_Min_Area = 4,
#  Streak_Thickness (Optional, default is 1.5),
  Streak_Thickness = 0.7,
&END

 &SNESTIMATORIN
   Gain = 309,
   Confusion_Sigma = 8.7,
   Read_Noise = 9,
 &END

&MOSAICINTIN 
# INTERP_METHOD = 1(default), 2(Drizzle),3(Grid),
   INTERP_METHOD = 1,
# used by Drizzle,
   DRIZ_FAC = 0.8,
# used by Grid,
   GRID_RATIO = 2,
&END

&MOSAICREINTIN
&END

&DETECT
# the maximum number of pixels in a cluster to be declared a detection,
# for bigger clusters the program raises the detection threshold, 
# and either splits the cluster into 2 or shrinks it down to the required size,
  Detection_Max_Area         = 100,
# the minimum number of pixels in a cluster to be declared a detection,
# include all the clusters here, since we are looking for radhits,
  Detection_Min_Area         = 0,
  Detection_Threshold        = 4,
&END

&MOSAICPROJIN
&END

&MOSAICCOVGIN
   TILEMAX_X = 500, 
   TILEMAX_Y = 500, 
&END

&MOSAICDUALOUTLIERIN
#  MIN_OUTL_IMAGE = 1,
#  MIN_OUTL_FRAC = 0.2,
  MAX_OUTL_IMAGE = 1,
  MAX_OUTL_FRAC = 1,
TILE_XSIZ = 500, 
   TILE_YSIZ = 500, 
&END

&LEVEL
  Threshold_Ratio   = 0.5,
# (Optional, default is 0.500000),
&END

&MOSAICOUTLIERIN
   THRESH_OPTION = 2, 
   BOTTOM_THRESHOLD = 4., 
   TOP_THRESHOLD = 4., 
   MIN_PIX_NUM = 3, 
   TILE_XSIZ = 500, 
   TILE_YSIZ = 500, 
&END

&MOSAICRMASKIN
  RM_THRESH = 0.5,
  MIN_COVERAGE = 3,
  MAX_COVERAGE = 100,
&END


&MOSAICCOADDIN
   TILEMAX_X = 1000, 
   TILEMAX_Y = 1000, 
&END